Thursday, 11 February 2016

Modelling to save Sellafield!

At the February Sci-Bar meeting, Alex Brown, a chemist from the National Nuclear Laboratory in Warrington delivered an enthusiastic presentation on in silico approaches [the current description of computer based data analysis] to managing the challenges of cleaning up Britain's first nuclear plant at Sellafield. Using a set of images and a time-lapse video, Alex took us through the acronym-filled world of the former Windscale site, which grew out of the earlier Royal Ordnace works, to take advantage of the early stage developments that underpinned the nuclear weapons industry. The various components of the plant that have been built since the World War II, comprise reactor towers, fuel waste ponds and a range of waste storage areas. These are all there to deal with the the original purpose of power generation via the Magnox system, and the safe storage and disposal of on site waste. As Alex reminded us, Sellafield also handles waste brought in by rail from other plants around the country. It is likely that complete decommissioning of Sellafield will take up to 100 years from today. The inevitable "fall out" from an industry that incorporated a large number of empirical process decisions, as this embryonic industry developed, is a mixture of decaying radioactive waste in formulations that are not entirely understood. As with all complex problems in Science and Engineering, the application of computational modelling is being increasingly deployed in order to manage the clean up processes, with a view to developing the safest, most cost efficient and quickest solution to restoring Sellafield to its former rural beauty! Such problems are of course very familiar to the citizens of Widnes and Runcorn, who live alongside similar consequences of the early Chemical Industry in these towns! The ever present dichotomy of job creation and technical advance versus health and environmental risk!
Alex used a specific example of the pH related problems encountered in the management of settled sludge in a particular storage "tank". Acidification caused by aeration of the sludge tank, had an important influence of the solubility of Brucite, one of the Magnesium containing components of nuclear waste residues from Magnox reactors. Alex took us through an explanation of the use of a standard equilibrium equation for the solubilisation of Brucite at a range of pHs, starting from above 11, down to just above 10. By calculating the predicted solubility of Brucite in solutions of different pHs, the aim was to predict the Brucite concentration over a period in the on-site container, using a set of known temperatures and pressures. However, the modelling team had some concerns over elements of uncertainty surrounding the tank dimensions and the mixing parameters. Unfortunately, the model showed considerable deviation from the observed Brucite behaviour. 

By adding magnetite into a set of simulation experiments, a closer fit to the observed solubility characteristics in the tank was obtained. As the pH drops from its starting alkaline value as dissolved, atmospheric CO2 acidifies the liquor in the sludge tank, there is a concomitant impact on the equilibrium position of the liquid versus solid phase of Brucite in the waste mixture. It seems to me that since this is an accepted outcome of the plant configuration (ie aeration cannot be conveniently contained), the model requires incorporation of the multiple pH dependent events that will collectively determine the distribution of ionised Brucite in its dissolved and precipitated phases in the mixture. It was good to hear that Alex and his colleagues are now developing more sophisticated models in order to address such issues.

Alex, was clearly a passionate advocate of modelling approaches to helping manage such processes,  and he provided further examples of empirical curve fitting procedures in order to deal with client generated data (which raised an eyebrow in the audience!). Irrespective of the physical basis of such curve fitting equations, providing they provide the client with a robust means of predicting behaviour, they are valuable. Industrial protocols can be developed from such modelling to manage processes such as nuclear waste removal and, in more progressive examples, to help design new generation nuclear reactor plants. Alex's colleagues were in negotiations with Chinese organisations fro this very reason.

As is the norm at the Widnes SciBar, the audience contained a sprinkling of seasoned veterans of the nuclear industry, who shared some of their fundamental knowledge and experience, which added colour to the talk. Alex also fielded several questions about the value of modelling, the time and computing power needed, and Bob invited Alex to comment on the future challenges and opportunities for Nuclear Power. There were also some detailed questions about gaseous waste issues, the replacement of Magnesium casing with Zirconium and several more general questions about site access and visitors. Bob, it might be an opportunity for a SciBar coach trip! In the absence of an immediate trip, "Britain’s Nuclear Secrets – Inside Sellafield" with Jim Al-Khalili which was on the BBC last year., isn't currently available via the BBC, but it is here:- www.dailymotion.com/video/x3orm62

Thanks again to Alex and all those who attended: another full house at the Hillcrest Hotel. The next talk will be announced by Bob, and looks at the future of technology through the eyes of Star Trek's creator, Gene Rodenberry! And I leave below a link for those wishing to swell the ranks of the British Science Association. Personally, why wouldn't you!

The British Science Association can be accessed here. 

Dave Hornby and Bob Roach

Tuesday, 9 February 2016

Widnes SciBar 10th February 2016

The next meeting of Widnes SciBar will be at 7:30 pm on Wed 10th Feb in the Trafalgar Room (upstairs) at the Hillcrest Hotel.

Alex Brown 

National Nuclear Laboratory (Warrington)

Modelling to help clean up Sellafield

You can read more here.
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Displaying Widnes_SciBar-Advert_02-16.doc.

An age old problem?

Photo of Dr Joao Pedro De MagalhaesJanuary's Sci Bar was delivered by Dr Joao Pedro De Magalhaes from the University of Liverpool's Institute of Integrative Biology. The topic was close to the hearts (perhaps literally) of everyone in the audience, which was, as usual, a full house. Bob Roach thanked Joao (following a group discussion on consensus pronunciation), as Pedro, for agreeing by return of email to turn up so close to New Year. The aim of the talk was to explore what could be learned from comparing the genetics of ageing in man and in a wide range of organisms, from whales and mice, to the simpler eukaryotes: Baker's yeast and Caenorhabditis elegans. In addition Joao discussed the types of genes that seemed to be associated with longevity. In keeping with the influence of epigenetics in contemporary clinical and behavioural research, there was a discussion of the environmental factors, including diet, that might influence life-span.

Using examples drawn from a wide spectrum of evolutionary examples, Joao began with a statement of the central dogma of Molecular Biology, originally proposed by Francis Crick: DNA makes RNA makes protein. It was in this context that he explained how mutations in the genome could give rise to proteins of modified function, which in turn could potentially influence life-span. What was striking from one of Joao's slides, was the "investment" that simple model organisms make in age-related processes. For example, out of around 6 000 genes, the simple unicellular yeast has over 800 genes linked in some way to life-span. Clearly, many of these genes will provide essential functions that impact upon ageing, but are probably there to provide other key roles in general growth and reproduction of yeast. And what of the role of non-coding RNAs in these mechanisms?

The gene associated with the maintenance of the tips of chromosomes, or telomeres, was also discussed as an important factor in cellular aging, with Dolly the Sheep owing its early onset ageing characteristics being partly a result of a dysfunctional telomerase activity. Companies like Geron in California who focus on understanding the genetic factors influencing life-span, seem to provide "wealthy" citizens the opportunity to extend life and in particular the quality of life at an advanced age.

There were two issues raised in the presentation that seemed to capture the audience's attention. The first was a study of the correlation between height and life expectancy and the second was the explanation behind the exceptional longevity of whales. The gene encoding the growth hormone receptor in both mice and men, when mutated can supply a form of "resistance" to cancer and diseases in general and indirectly promotes life-span. Whilst the speaker acknowledged that the sample size and its restricted nature (a self contained US community), made extrapolation questionable; the trend was intriguingly clear in the particular sample  tested.
 
A bowhead whale diving.The Bowhead whale has proved a rich seem of longevity related research but, suggestions about the age estimates are not easy to verify; notwithstanding old harpoon scars! However, the superb, online resource provided by Joao and his colleagues is surely the way forward for unlocking teh potential of comparative genomics in improving the quality of life as the mean life-span of humans slowly increases!

You can find access to the Bowhead Whale Genome Project here.

Wednesday, 13 January 2016

Next Widnes Sci Bar Meeting

Widnes Sci Bar: Talking science in a relaxed setting

What? A scientist talks about their research and then you can discuss it and ask questions

Where? Hillcrest Hotel, Cronton Lane,Widnes, WA8 9AR

Who for? Widnes Sci Bar is for anyone with an interest in science or a wish to know more about science.


When? 7:30 pm, Wed 13th Jan 2016

This week's Sci Bar will include a presentation by

Dr Joao Pedro De Magalhaes



from the Institute of Integrative Biology, the University of Liverpool, entitled: 



Genes regulating aging and the quest for immortality

Photo of Dr Joao Pedro De MagalhaesAbstract: Hundreds of genes are now known to regulate aging and have been shown to increase longevity by up to ten fold in animal models. Drugs mimicking the longevity effects of these genes are now being developed. Studies of species with exceptional longevity - like bowhead whales, or disease resistance - like naked mole-rats, may help to improve human health and prevent diseases.

 


Presented by Friends of Catalyst & the Catalyst Science Discovery Centre

Tuesday, 8 December 2015

Announcing: Toxic Tales and Animal Evolution!

The next meeting of Widnes SciBar will be as follows:-
 
7:30 pm on Wed 9th Dec in the Trafalgar Room at the Hillcrest Hotel, Cronton Lane,Widnes, WA8 9AR.
 
Please note that we recently changed to a different room - the Trafalgar room is on the first floor.
 
Kevin Arbuckle from the Department of Evolutionary Biology, Zoology and Ecology, University of Liverpool, will talk about:-
 
Telling Toxic Tales - Chemical Warfare in Animal Evolution.
 
Here is Kevin’s description of his talk:-
 
Kevin ArbuckleVenomous and poisonous animals inspire fear and fascination. Animals from across the ‘tree of life’ have used toxic and repellent chemicals to catch prey and avoid becoming a meal themselves. Not only do many of these species advertise their defence with beautiful colours but toxins may even shape the evolution of the animals that possess them. 

His University Home Page is here 



 

Bob Roach 30th November 2015.